no, we don't have such a pipeline
On 11/9/2022 11:39 AM, AJ wrote:
External Email - Use Caution
Hi,
Is there a specific pipeline for segmenting the cerebellum, cortical
gray and deep nuclei? Like the one for hippocampus and thalamus?
Best
___
that looks to me like it accurately segmented all the un-partial-volumed
white matter in the cerebellum. Are you hoping it would segment the smaller
folia as wm? I guess it could, but those voxels all look like they have gm
in them too
On Mon, 4 Sep 2017, José Gómez-Feria
Ferreiro wrote:
H
hmmm, not much gray/white contrast in the cerebellum. Can you send me the
aseg.presurf.mgz also?
On Mon, 4 Sep 2017, José Gómez-Feria Ferreiro wrote:
Hello Bruce,
Thank you for your email. I understand the issue about distinguishing between
grey and white matter.
However, I can get a nice seg
HI José
the cerebellum scan quality can be hugely variable due to its intrinsic
structure (tiny, almost fractal folia) and distance from isocenter. If you
upload the subject we will take a look, or send a snapshot. Sometimes if
the cerebellum is too dark in the norm.mgz you can add a control p
You might want to take at look at the following article.
Bigler ED, Abildskov TJ, Wilde EA, et al. Diffuse damage in pediatric traumatic
brain injury: a comparison of automated versus operator-controlled
quantification methods. Neuroimage 2010;50:1017-26.
Cerebellar GM volumes were similar betw
Hi Pedro,
1) We have released a number of beta versions of the source already, and
people are welcome to it if they want it. We're hoping to have an
official release by the end of the year or soon afterwards.
2) Cerebellum is hard. I don't think you can really see enough of it at
standard ~1
Hi Lars,
yes, probably the aseg would be a better way to do it. Is the vermis only
distinguished on MR by it's location or are their signal differences
between it and surrounding tissue (forgive my ignorance)?
Bruce
On Fri, 9 Dec
2005, Lars M. Rimol wrote:
Hi Bruce and Satra,
Our specific
