HI José
the cerebellum scan quality can be hugely variable due to its intrinsic
structure (tiny, almost fractal folia) and distance from isocenter. If you
upload the subject we will take a look, or send a snapshot. Sometimes if
the cerebellum is too dark in the norm.mgz you can add a control point and
recreate the using the -canorm-usecps flag
cheers
Bruce
On Fri, 1 Sep 2017, José Gómez-Feria Ferreiro wrote:
Dear Freesurfer,
I have been doing some MRI segmentations using the "mri2mesh" command (which does
"recon all").
However, I noticed the cerebellum segmentation is not correctly done. It
considers the cerebellum as
white matter but it also has grey matter. Is there a way to make a more precise
segmentation of the
cerebellum?
Best regards,
José Gómez-Feria Ferreiro
MD/PhD candidate
Grupo de Trastornos del Movimiento. Lab 104
Programa de Investigación de Neurociencias
Instituto de Biomedicina de Sevilla (IBiS) Hosp.Univ. Virgen del
Rocío/CSIC/Univ. de Sevilla
Avda. Manuel Siurot s/n.
41013 - Sevilla (España)
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