There is not an easy way to do this. A couple of things you can do:
First, convert the MNI152 coordinate to MNI305 coordinate. Then
(1) load the cluster into tksurfer or freeview with fsaverage. fsaverage
is in mni305 space, so you should be able to plug the coordinates into
the RAS space. The
reesurfer@nmr.mgh.harvard.edu
Subject: RE: [Freesurfer] MNI coords
Hi Alex,
you should get the MNI coords for all your subjects - recon-all runs the
MNI talairach procedure. Did you move things around on disk? I think there
are times that it can't find the xform anymore because it is in a different
loca
l: [EMAIL PROTECTED]
From: Bruce Fischl [mailto:[EMAIL PROTECTED]
Sent: Thu 4/6/2006 11:03 PM
To: Fornito, Alexander
Cc: freesurfer@nmr.mgh.harvard.edu
Subject: RE: [Freesurfer] MNI coords
Hi Alex,
you should get the MNI coords for all your subjects - recon-all run
8344 1624
Fax: +61 3 9348 0469
email: [EMAIL PROTECTED]
From: Bruce Fischl [mailto:[EMAIL PROTECTED]]
Sent: Thu 4/6/2006 11:03 PM
To: Fornito, Alexander
Cc: freesurfer@nmr.mgh.harvard.edu
Subject: RE: [Freesurfer] MNI coords
Hi Alex,
you should get the MNI c
: Fornito, Alexander
Cc: freesurfer@nmr.mgh.harvard.edu
Subject: RE: [Freesurfer] MNI coords
Hi Alex,
you should get the MNI coords for all your subjects - recon-all runs the
MNI talairach procedure. Did you move things around on disk? I think there
are times that it can't find the xform anymore be
M
To: Fornito, Alexander
Cc: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] MNI coords
Hi Alex,
try "volume scanner coords" for the subjects that don't have the MNI
coords. Sorry, I know this is more confusing than it needs to be. In the
new version you just specify voxel coords :)
Bru
30/2006 11:41 AM
To: Fornito, Alexander
Cc: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] MNI coords
Hi Alex,
try "volume scanner coords" for the subjects that don't have the MNI
coords. Sorry, I know this is more confusing than it needs to be. In the
new version you j
8344 1624
Fax: +61 3 9348 0469
email: [EMAIL PROTECTED]
-Original Message-
From: Bruce Fischl [mailto:[EMAIL PROTECTED]
Sent: Thu 3/30/2006 11:41 AM
To: Fornito, Alexander
Cc: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] MNI coords
Hi Alex,
try "volume scanner coords
Hi Alex,
try "volume scanner coords" for the subjects that don't have the MNI
coords. Sorry, I know this is more confusing than it needs to be. In the
new version you just specify voxel coords :)
Bruce
On Thu, 30 Mar 2006, Fornito,
Alexander wrote:
Hi,
I need to manually specify a seed po
