No problem. Thanks again!

Alex Fornito
M.Psych/PhD (clin. neuro.) candidate
Melbourne Neuropsychiatry Centre and Department of Psychology
National Neuroscience Facility
The University of Melbourne
Levels 2 & 3, Alan Gilbert Building
161 Barry St
Carlton South Vic 3053 Australia
Ph:    +61 3 8344 1624
Fax:   +61 3 9348 0469
email: [EMAIL PROTECTED]



-----Original Message-----
From: Bruce Fischl [mailto:[EMAIL PROTECTED]
Sent: Thu 3/30/2006 11:41 AM
To: Fornito, Alexander
Cc: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] MNI coords
 
Hi Alex,

try "volume scanner coords" for the subjects that don't have the MNI 
coords. Sorry, I know this is more confusing than it needs to be. In the 
new version you just specify voxel coords :)

Bruce
On Thu, 30 Mar 2006, Fornito, 
Alexander wrote:

> Hi,
> I need to manually specify a seed point for the corpus callosum cutting plane 
> on some of my images, although some of them don't seem to have the MNI 
> coordiates available through clicking view >information in tkmedit. Not sure 
> why this is the case, since other images do have this info. Specifying the 
> RAS coord doens't fix the problem. I'm using recon-all version 1.104 
> 2005/09/07 (I'm trying to finish off a study using the dev version and wold 
> dearly like to avoid re-processing everyone with a newer version!!). Any help 
> is much appreciated.
> Many thanks,
> Alex
>
>
>
> Alex Fornito
> M.Psych/PhD (clin. neuro.) candidate
> Melbourne Neuropsychiatry Centre and Department of Psychology
> National Neuroscience Facility
> The University of Melbourne
> Levels 2 & 3, Alan Gilbert Building
> 161 Barry St
> Carlton South Vic 3053 Australia
> Ph:    +61 3 8344 1624
> Fax:   +61 3 9348 0469
> email: [EMAIL PROTECTED]
>
>
>
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
>


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