Re: [Freesurfer] trac-all version 5.3 crash

2013-12-06 Thread Z K
Jon, I tested this by completely removing XQuartz from my machine (which deletes /usr/X11/lib/libX11.6.dylib). I then ran freesurfer and got the same error as you. I then reinstalled XQuartz, which restored the /usr/X11/lib/libX11.6.dylib file, reran freesurfer, and everything worked fine. S

[Freesurfer] trac-all version 5.3 crash

2013-12-06 Thread Jon Wieser
Hi freesurfer experts, I've recnetly upgraded to freesurfer 5.3 (lion) 64bit version on our Mac Pro when I run trac-all -prep, I get the following error: writing to /Studies/MJMRI/MJ0030/freesurfer/dmri/dwi_orig.nii.gz... mri_probedicom --i /Studies/MJMRI/MJ0030//s1869/i1560627.MRDC.1 > /Stud