RE: [Freesurfer] the unknown zone in the average

2007-12-19 Thread Bruce Fischl
without noncortical regions? Thank you, Xin From: Bruce Fischl [mailto:[EMAIL PROTECTED] Sent: Wed 12/19/2007 10:26 AM To: Wang, Xin Cc: freesurfer Subject: Re: [Freesurfer] the unknown zone in the average Hi Xin, you can use mris_anatomical_stats with -l

RE: [Freesurfer] the unknown zone in the average

2007-12-19 Thread Wang, Xin
From: Bruce Fischl [mailto:[EMAIL PROTECTED] Sent: Wed 12/19/2007 10:26 AM To: Wang, Xin Cc: freesurfer Subject: Re: [Freesurfer] the unknown zone in the average Hi Xin, you can use mris_anatomical_stats with -l ?h.cortex.label, which should be generated automatically

Re: [Freesurfer] the unknown zone in the average

2007-12-19 Thread Bruce Fischl
Hi Xin, you can use mris_anatomical_stats with -l ?h.cortex.label, which should be generated automatically, to avoid noncortical regions. cheers, Bruce On Wed, 19 Dec 2007, Wang, Xin wrote: Hello, Group, We calculate the globe mean of thickness by using mris_convert -c lh.thickne

[Freesurfer] the unknown zone in the average

2007-12-19 Thread Wang, Xin
Hello, Group, We calculate the globe mean of thickness by using mris_convert -c lh.thickness lh.white lh.thickness.asc mris_convert -c rh.thickness rh.white rh.thickness.asc and then merge two .asc files to calculate the average Does this procedure include the neo