Have you tried using mri_label2vol with the aparc as the input instead
of the aseg?
doug
On 04/14/2012 12:06 PM, Bruce Fischl wrote:
> mris_calc should do what you want (although the aseg is not zero in
> the cortex, so you will change the cortical labels)
>
> cheers
> Bruce
> On Sat, 14 Apr 201
mris_calc should do what you want (although the aseg is not zero in the
cortex, so you will change the cortical labels)
cheers
Bruce
On Sat, 14 Apr 2012, Adil
Javed wrote:
Hi,
Is there a way to subtract segmented files in freesurfer? For example,
aparc+aseg.mgz - aseg.mgz= aparc.mgz only?
Hi,
Is there a way to subtract segmented files in freesurfer? For example,
aparc+aseg.mgz - aseg.mgz= aparc.mgz only? I am interested in looking only at
the cortex. I find that label to volume conversion doesn't give me a nice
segmented cortex, with some patchy areas of intensities lost.
tha
