Re: [Freesurfer] recon-all -s subid exited with ERRORS

2018-06-10 Thread Lee, Seonjoo
External Email - Use Caution I reran after adding ">> log", it went through... It's strange that it won't run without >>log Thank you. -Seonjoo On 6/9/18, 10:15 PM, "freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Bruce Fischl" wrote: hmmm, I don't. Does your disk

Re: [Freesurfer] recon-all -s subid exited with ERRORS

2018-06-09 Thread Bruce Fischl
hmmm, I don't. Does your disk have space on it? Can you try rerunning the last command in the recon-all.cmd file and see if it completes? Bruce On Sun, 10 Jun 2018, Lee, Seonjoo wrote: External Email - Use Caution Hi Bruce, recon-all did not run, and I could not figure out

[Freesurfer] recon-all -s subid exited with ERRORS

2018-06-09 Thread Lee, Seonjoo
External Email - Use Caution Hi Bruce, recon-all did not run, and I could not figure out the problem. Do you have any clue what could be? The log file does not tell anything… The command was the most simplest one (using only t1). If you need more information to figure out the caus