Re: [Freesurfer] re reconstructions

2012-11-26 Thread Bruce Fischl
yes, that would retain edits cheers Bruce On Mon, 26 Nov 2012, Catherine Bois wrote: > Ps. To make it clearer; would this command recon-all -autorecon1 -autorecon2 > -autorecon3, incorporate all the edits amde, or would it merely overwrite > them and just regenerate the brain surface from scratch

Re: [Freesurfer] re reconstructions

2012-11-26 Thread Bruce Fischl
Hi Cathy you will waste a lot of processor time this way, but all edits should be retained no matter how early you start in the process. cheers Bruce On Mon, 26 Nov 2012, Catherine Bois wrote: > Hi, > > I am currently in the process of reconstructing my brains after performing > edits. I am s

Re: [Freesurfer] re reconstructions

2012-11-26 Thread Catherine Bois
Ps. To make it clearer; would this command recon-all -autorecon1 -autorecon2 -autorecon3, incorporate all the edits amde, or would it merely overwrite them and just regenerate the brain surface from scratch? Thanks On 26 November 2012 13:13, Catherine Bois wrote: > Hi, > > I am currently in the

[Freesurfer] re reconstructions

2012-11-26 Thread Catherine Bois
Hi, I am currently in the process of reconstructing my brains after performing edits. I am submitting them to a system named condor, which allows them to be processed in parallel, reducing time. However, I am unsure of how to best use the script that takes into account all the changes made. Is it