Re: [Freesurfer] qdec / qcache

2007-08-14 Thread Doug Greve
Yea, sorry, a few months ago I changed the way we store surface overlay files. I used to try to "reshape" them so that no dimension was greater than 32k (a nifti/analyze limit), but it just kept creating problems. If you're going to nifti/analyze, you can still reshape them, but you have to speci

Re: [Freesurfer] qdec / qcache

2007-08-14 Thread Nick Schmansky
Claus, Has the recon-all -qcache been run for the subject nmr00199? If so, was there a significant number of days since -qcache was run on the other subjects? If so, you may need to run recon-all -qcache on all the subjects you want to use with qdec. Nick On Tue, 2007-08-14 at 18:59 -0400, Cl

[Freesurfer] qdec / qcache

2007-08-14 Thread Claus Reinsberger
Hi everybody, I tried to run the qdec-tool in the dev-env, but experienced some problems with my last subject. This is the environment, I'm working in: FREESURFER_HOME: /usr/local/freesurfer/dev Build stamp: freesurfer-Linux-centos4-dev-20070811 RedHat release: CentOS release 4.4 (Final) Kern