Re: [Freesurfer] mris_make_template question

2009-11-13 Thread Guang Zeng
.com > CC: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] mris_make_template question > > no, you shouldn't run 2 and 3. sulc and curv are *not* surface formats, > so the code dies trying to read them as such > On Fri, 13 Nov 2009, Guang Zeng > wrote: > >

Re: [Freesurfer] mris_make_template question

2009-11-13 Thread Bruce Fischl
y, the results from command 1 and 4 showed that they have computed > sulc, do I still need run command 2 and command 3 in the "Prep Step"? > > Thanks a lot! > Guang > >> Date: Fri, 13 Nov 2009 08:15:33 -0500 >> From: fis...@nmr.mgh.harvard.edu >> To: freesurfer...@hot

Re: [Freesurfer] mris_make_template question

2009-11-13 Thread Guang Zeng
0 > From: fis...@nmr.mgh.harvard.edu > To: freesurfer...@hotmail.com > CC: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] mris_make_template question > > Hi Guang, > > it still needs the ?h.sphere files as those are used to establish the > spherical coordinate syste

Re: [Freesurfer] mris_make_template question

2009-11-13 Thread Bruce Fischl
Hi Guang, it still needs the ?h.sphere files as those are used to establish the spherical coordinate system. cheers, Bruce On Thu, 12 Nov 2009, Guang Zeng wrote: > > Hi, there, > > I am going to make our own template. Based on the introduction in FreeSurfer > WIKI "The Surface Registration Pro

[Freesurfer] mris_make_template question

2009-11-12 Thread Guang Zeng
Hi, there, I am going to make our own template. Based on the introduction in FreeSurfer WIKI "The Surface Registration Process; Template", the first step is "Prep". "The process starts ("Prep") by choosing one reference subject, and producing a template (Here, mytemp0.tif). No ?h.sphere is req