Re: [Freesurfer] mri_vol2vol call problem

2013-02-25 Thread Douglas N Greve
Hi Greg, the target (--targ) should be a volume, not the name of a subject (eg, 816/mri/orig.mgz) doug On 02/21/2013 02:23 PM, Gregory Kirk wrote: > Greetings lords of freesurfer! > > I am having a problem getting a combined cvs warp+bbregister to map an FA > volume > onto a template. > > mri_vol

[Freesurfer] mri_vol2vol call problem

2013-02-21 Thread Gregory Kirk
Greetings lords of freesurfer! I am having a problem getting a combined cvs warp+bbregister to map an FA volume onto a template. mri_vol2vol --targ 816 --m3z combined_to816_elreg_afteraseg-norm.m3z --noDefM3zPath --reg /study5/aa-scratch/TEENEMO/twins_tracula/recons/821/dmri/xfms/anatorig2diff