You can ignore that
Bruce
On Oct 12, 2012, at 5:24 PM, dgw wrote:
> Hi,
>
> Thank you for the advice. I have a follow-up question. I seem to be
> getting a warning:
> non-equal flip_angle found for the volume 1.
> Flip_angle is set to zero.
> The full log is at the bottom. Using
> free
Hi,
Thank you for the advice. I have a follow-up question. I seem to be
getting a warning:
non-equal flip_angle found for the volume 1.
Flip_angle is set to zero.
The full log is at the bottom. Using
freesurfer-Linux-centos4_x86_64-stable-v5.1.0-20110514
Setting up environment fo
you need to register them.
cheers
Bruce
On Wed, 10 Oct 2012, dgw wrote:
> Hi,
>
>> From the wiki (http://www.freesurfer.net/fswiki/mri_ms_fitparms), I
> can see that mri_ms_fitparms can accept and afi map. Can someone tell
> me what assumptions the -afi subcommand makes about the position of
> th
Hi,
>From the wiki (http://www.freesurfer.net/fswiki/mri_ms_fitparms), I
can see that mri_ms_fitparms can accept and afi map. Can someone tell
me what assumptions the -afi subcommand makes about the position of
the afi map relative to the flash volumes? does it calculate
everything in scanner coor
why do you want parameter maps? What acquisitions do you have?
On Fri, 5 May
2006, adam walczak wrote:
Ok. Thanks. So what would the data I use to make the parameter maps also work
for the reconstruction pipeline?
Adam
Bruce Fischl <[EMAIL PROTECTED]> wrote: you don't need it at all if you
Ok. Thanks. So what would the data I use to make the parameter maps also work for the reconstruction pipeline? AdamBruce Fischl <[EMAIL PROTECTED]> wrote: you don't need it at all if you have T1 weighted data. Only if you're interested in the parameter maps themselves.BruceOn Thu, 4 May 2006, ada
you don't need it at all if you have T1 weighted data. Only if you're
interested in the parameter maps themselves.
Bruce
On Thu, 4 May 2006, adam
walczak wrote:
At what point in the processing pipeline is mri_ms_fitparms?
I am trying to convert data without header information (TE, TR, Flip
At what point in the processing pipeline is mri_ms_fitparms? I am trying to convert data without header information (TE, TR, Flip angle) to data that freesurfer can use using mri_ms_fitparms and entering that info. This creates a T1 and PD image but I want to run it through the entire reconstruct
yes to the T1. The PD units are arbitrary and includes other things like
T2*.
On
Fri, 2 Dec 2005, Christian Haselgrove wrote:
Hi,
What exactly is contained in the outputs of mri_ms_fitparms? Specifically:
the T1 volume looks like it might have T1 times in ms -- is this correct?
And I ass
Hi,
What exactly is contained in the outputs of mri_ms_fitparms?
Specifically: the T1 volume looks like it might have T1 times in ms -- is
this correct? And I assume that PD is proton density -- is there a
specific unit attached to these voxel values as well?
Thanks,
Christian
--
Christia
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