@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] mri_label2label issues
Try this: register the old/1st recon to the second with
bbregister --mov old/mri/nu.mgz --targ newsubject --t1 --reg reg.lta
Map the old surface into the new space
mris_apply_reg --lta reg.lta old/surf/lh.white newsubject/surf
:* Re: [Freesurfer] mri_label2label issues
Did you see this response from a few days ago?
On 10/27/2021 11:26 AM, Douglas N. Greve wrote:
I'm not sure what you did or how to interpret that pic. If I
understand, you ran a case through recon-all and created labels on
that case. You then reco
Associate
McGill University
Montreal Neurological Institute
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Douglas N. Greve
Sent: Wednesday, November 3, 2021 11:08 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] mri_label2label issues
Did you see this response from a few days ago?
On 10/27/2021 11:26 AM, Douglas N. Greve wrote:
I'm not sure what you did or how to interpret that pic. If I
understand, you ran a case through recon-all and created labels on
that case. You then recon-all again using a totally different output
wh
Institute
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Trisanna Sprung-Much
Sent: Wednesday, October 27, 2021 12:39 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] mri_label2label issues
External Email - Use Caution
that is correct Doug
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Douglas N. Greve
Sent: Wednesday, October 27, 2021 12:26 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] mri_label2label issues
I'm not sure what you did or how to interpret that pic. If I understand
I'm not sure what you did or how to interpret that pic. If I understand,
you ran a case through recon-all and created labels on that case. You
then recon-all again using a totally different output where you improved
the homogeneity. You now want to map the labels you created on the 1st
run to t
