Re: [Freesurfer] freesurfer and debian "etch"

2006-02-26 Thread Bruce Fischl
Hi Darren, we have made no mods to FSL, nor do we plan to. We just include it for one-stop-shopping. Bruce On Sun, 26 Feb 2006, Darren Weber wrote: I have the dev version installed and running on Debian Sarge (I tried an upgrade from sarge to etch for a while, but it was unstable in too m

Re: [Freesurfer] freesurfer and debian "etch"

2006-02-26 Thread Darren Weber
I have the dev version installed and running on Debian Sarge (I tried an upgrade from sarge to etch for a while, but it was unstable in too many important ways for me to continue using it for daily work). On sarge, the only problem was creating a symlink for libtiff.so.3: # cd /usr/lib # ln

Re: [Freesurfer] freesurfer and debian "etch"

2006-02-24 Thread wilms
Dear Nick, I tried the newest centos4 build (20060223) but to no avail. I still cannot see bert's entire pial surface using the command tksurfer bert rh pial Do you have further suggestions? Do you know of someone using freesurfer under debian "etch"? Marcus Nick Schmansky wrote: > M

Re: [Freesurfer] freesurfer and debian "etch"

2006-02-22 Thread Nick Schmansky
Marcus, You may want to try the centos4 build of freesurfer. It is built against libstdc++.so.6, whereas the rh9 build builds against libstdc+ +.so.5. I don't know whether this would account for the partial brain you are seeing, or why, but its worth a try. Nick On Wed, 2006-02-22 at 10:58 +0

[Freesurfer] freesurfer and debian "etch"

2006-02-22 Thread wilms
Dear all, does someone out there run freesurfer (freesurfer-Linux-rh9-dev20060210-full.tar.gz) under debian etch? Installation runs smoothly, however, when I test the freesurfer installation with medpc32:~$ tksurfer bert rh pial only a tiny fraction of Bert's brain is displayed. The GUI otherwis