Dear Bruce,
It worked, I transferred it and is ready for view.
The original recon was with the command
recon-all -3T -openmp 8 -notal-check (the raw volume was analyze).
I noted a small gyrus excluded from the surfaces, located in the right
hemisphere posteriorly; the recon also did not include tw
try changing the local dir to /usr/local/fs5.3/freesurfer/subjects and just
putting the file without a path
cheers
Bruce
On Mon, 10 Nov 2014, Octavian Lie wrote:
> Thank you, Bruce
>
> I tried to upload the subject (tar.gz, 183 Mb) to the ftp, followed
> instructions
>
> ftp surfer.nmr.mgh.h
Thank you, Bruce
I tried to upload the subject (tar.gz, 183 Mb) to the ftp, followed
instructions
ftp surfer.nmr.mgh.harvard.edu
anonymous
my email
cd transfer/incoming
put /usr/local/fs5.3/freesurfer/subjects/rightgyrusfailure.tar.gz
and I get this:
local: /usr/local/fs5.3/freesurfer/subjects/
Hi Octavian
If you upload the subject we will take a look
Cheers
Bruce
> On Nov 9, 2014, at 10:40 PM, Octavian Lie wrote:
>
> Dear all,
>
> 1. in the attached there is a gyrus that does not incorporated into surfaces,
> whatever I do (wm edits/topological defects-cloning voxels from brainma
