Usually what I do is create a sym link called "current" that I point to
the newest version of Freesurfer. e.g.
cd /usr/local/freesurfer
ln -s $PWD/freesurfer-5.1.0 current
So then in my .bashrc file I set
FREESURFER_HOME='/usr/local/freesurfer/current'
Obviously you can change this if you wante
Thanks.
Best,
-
Josh
On Thu, Feb 21, 2013 at 10:05 AM, Shantanu Ghosh <
shant...@nmr.mgh.harvard.edu> wrote:
> Or you may have multiple freesurfer versions within the freesurfer
> director, something like
> /freesurfer/5.0, /freesurfer/5.1, /freesurfer/5.2b, /freesurfer/5.2 etc.
> and then
> exp
Or you may have multiple freesurfer versions within the freesurfer
director, something like
/freesurfer/5.0, /freesurfer/5.1, /freesurfer/5.2b, /freesurfer/5.2 etc.
and then
export FREESURFER_HOME=/freesurfer/5.1 etc
Hth, S.
On Thu, February 21, 2013 12:59 pm, Shantanu Ghosh wrote:
> Hi Josh,
> y
Hi Josh,
you can modify the SetUpFreeSurfer.sh to source the correct version.
Hth, Shantanu
On Thu, February 21, 2013 12:55 pm, Joshua Lee wrote:
> If I want to install the new Freesurfer version but retain the older
> Freesurfer install as well, what issues might I face?
> Is it simply sourcing t
If I want to install the new Freesurfer version but retain the older
Freesurfer install as well, what issues might I face?
Is it simply sourcing the usual setup scripts?
export FREESURFER_HOME=/freesurfer
source $FREESURFER_HOME/SetUpFreeSurfer.sh
-
Josh
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