Re: [Freesurfer] dtrecon

2019-02-20 Thread Greve, Douglas N.,Ph.D.
It cannot. It just does simple tensor analysis. Not sure what else to use. On 2/20/19 9:02 AM, john Anderson wrote: External Email - Use Caution Hi FS experts, I would like to inquire about the command "dtrecon" in Freesurfer. Is this command able to process multishell diffusion data? if

[Freesurfer] dtrecon

2019-02-20 Thread john Anderson
External Email - Use Caution Hi FS experts, I would like to inquire about the command "dtrecon" in Freesurfer. Is this command able to process multishell diffusion data? if not would you recommend any method? Thanks in advance John___ F

Re: [Freesurfer] dtrecon

2016-11-13 Thread Douglas Greve
No, you can use version 6.0 dt_recon with anat analyses from any FS version On 11/12/16 3:26 PM, John Anderson wrote: Dear Freesurfer experts, I want to analyze DTI data using the command *dt_recon --i dwi.nii --b bvals bvecs --s subj1 --o /subj1* Under Fressurfer 5.3, the analysis fail showing

[Freesurfer] dtrecon

2016-11-12 Thread John Anderson
Dear Freesurfer experts, I want to analyze DTI data using the command  dt_recon --i dwi.nii --b bvals bvecs --s subj1 --o /subj1   Under Fressurfer 5.3, the analysis fail showing this error message: nifti1Read(): unsupported slice timing pattern 5 in /data/anaconda/mesgp/dtrecon3/subj1/dwi.nii