Re: [Freesurfer] dt_recon registration check

2019-02-22 Thread Greve, Douglas N.,Ph.D.
See here https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/MultiModalRegistration_freeview On 2/21/19 3:01 PM, Daniel Davidson Callow wrote: External Email - Use Caution Hello, I have run through dt_recon and want to use anatomically based segmentations (aseg) to create ROIs for the

[Freesurfer] dt_recon registration check

2019-02-21 Thread Daniel Davidson Callow
External Email - Use Caution Hello, I have run through dt_recon and want to use anatomically based segmentations (aseg) to create ROIs for the diffusion-weighted data using mri_vol2vol. I ran mri_vol2vol --mov $subj_dir/dtrecon/${subj}.${cond}./lowb.nii.gz --targ $subj_dir/diffu