Re: [Freesurfer] cortical thickness - comparing two groups within a ROI

.mgh.harvard.edu >> [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Douglas N Greve >> [gr...@nmr.mgh.harvard.edu] >> Sent: Tuesday, November 03, 2015 2:01 PM >> To: freesurfer@nmr.mgh.harvard.edu >>

Re: [Freesurfer] cortical thickness - comparing two groups within a ROI

t: Re: [Freesurfer] cortical thickness - comparing two groups within a ROI The y.mgh file is created by your call to mris_preproc (or by a subsequent call to mri_surf2surf for smoothing). The order of the subjects depends on how you called mris_preproc (which should match that in the fsgd file or

Re: [Freesurfer] cortical thickness - comparing two groups within a ROI

i >> >> >> *From:* freesurfer-boun...@nmr.mgh.harvard.edu >> [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Eryilmaz, H. >> Hamdi [hamdi.eryil...@mgh.harvard.edu] >> *Sent:* Friday, October 30, 2015

Re: [Freesurfer] cortical thickness - comparing two groups within a ROI

To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] cortical thickness - comparing two groups within a ROI On 10/30/2015 01:36 PM, Eryilmaz, H. Hamdi wrote: > Sorry, the figures I inserted in the text did not appear in the email. > I attach them now. > > B

Re: [Freesurfer] cortical thickness - comparing two groups within a ROI

n...@nmr.mgh.harvard.edu > [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Eryilmaz, H. > Hamdi [hamdi.eryil...@mgh.harvard.edu] > *Sent:* Friday, October 30, 2015 1:32 PM > *To:* freesurfer@nmr.mgh.harvard.edu > *Subject:* [Freesurfer] cortical thickness - comparing two groups &g

[Freesurfer] cortical thickness - comparing two groups within a ROI

Dear FS experts, I have a question about extracting average cortical thickness from a manually created ROI. I am comparing 2 groups, namely PostFort and PreFort and my fsgd file appears as the following: GroupDescriptorFile 1 Title PostPreFortification Class PostFort Class PreFort InputSub