Re: [Freesurfer] cortical/subcortical volume based analysis

2017-10-14 Thread miracle ozzoude
l >> Sent: Saturday, October 14, 2017 11:27 AM >> To: Freesurfer support list >> Reply To: Freesurfer support list >> Subject: Re: [Freesurfer] cortical/subcortical volume based analysis >> >> Hi Paul >> >> if you use a property (like gm) to drive intersubj

Re: [Freesurfer] cortical/subcortical volume based analysis

2017-10-14 Thread Bruce Fischl
I still analyze it with mri_glm? Best,  Paul Sent from my BlackBerry 10 smartphone.   Original Message   From: Bruce Fischl Sent: Saturday, October 14, 2017 11:27 AM To: Freesurfer support list Reply To: Freesurfer support list Subject: Re: [Freesurfer] cortical/subcortical volume based analysis

Re: [Freesurfer] cortical/subcortical volume based analysis

2017-10-14 Thread miracle ozzoude
  From: Bruce Fischl Sent: Saturday, October 14, 2017 11:27 AM To: Freesurfer support list Reply To: Freesurfer support list Subject: Re: [Freesurfer] cortical/subcortical volume based analysis Hi Paul if you use a property (like gm) to drive intersubject registration it then becomes difficult to

Re: [Freesurfer] cortical/subcortical volume based analysis

2017-10-14 Thread Bruce Fischl
17 6:53 PM To: Freesurfer support list Reply To: Freesurfer support list Subject: Re: [Freesurfer] cortical/subcortical volume based analysis Hi Paul we typically do this type of analysis by looking at scatter plots of structure volumes (e.g. hippocampus). Alternatively, you can make maps, but tha

Re: [Freesurfer] cortical/subcortical volume based analysis

2017-10-13 Thread miracle ozzoude
Best,  Miracle Sent from my BlackBerry 10 smartphone.   Original Message   From: Bruce Fischl Sent: Friday, October 13, 2017 6:53 PM To: Freesurfer support list Reply To: Freesurfer support list Subject: Re: [Freesurfer] cortical/subcortical volume based analysis Hi Paul we typically do this ty

Re: [Freesurfer] cortical/subcortical volume based analysis

2017-10-13 Thread Bruce Fischl
Hi Paul we typically do this type of analysis by looking at scatter plots of structure volumes (e.g. hippocampus). Alternatively, you can make maps, but that opens up all the problems/difficulties of interpretation of VBM. Which did you mean? cheers Bruce On Fri, 13 Oct 2017, miracle ozzoude

[Freesurfer] cortical/subcortical volume based analysis

2017-10-13 Thread miracle ozzoude
Hello FreeSurfer experts, I want to perform a whole brain volume based group analysis for cortical and subcortical regions. That's something very similar to surface based group analysis for cortical thickness however, for volume. Is there a tutorial on how to do it? if yes, please can i get the li