Oh, you have CentOS4, try this version instead
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/tkregister2.bin.centos4.0_x86_64
doug
On 11/09/2012 02:23 PM, Eric Cunningham wrote:
> thanks for the tip knut.
> it appears to be redhat CentOS release 4.6
> -eric
>
> On Fri, Nov 9, 201
yes, that info will be helpful
doug
On 11/09/2012 03:46 AM, Knut J Bjuland wrote:
> Could you please send the information in /etc/redhat-release or the
> first lines when you start dmesg |less to the list. Do the cluster
> have Ubuntu or Redhat Linux?
>
> Knut J Bjuland
>
> On 08. nov. 2012 20:
This could be a number of things. Did you restore the tkregister2 to the
original? The tkregister2.bin command was compiled under Redhat OS5.
What OS are you using?
doug
On 11/07/2012 06:15 PM, Eric Cunningham wrote:
> i tried replacing this file in tktools with the new tkregister2.bin,
> an
i tried replacing this file in tktools with the new tkregister2.bin, and i
get a new error:
/lib64/tls/libc.so.6: version GLIBC_2.4 not found
On Mon, Nov 5, 2012 at 6:06 PM, Douglas Greve wrote:
>
> OK, I see the problem. I should have told you to put tkregsiter2.bin into
> /apps/fs510/tktools/
OK, I see the problem. I should have told you to put tkregsiter2.bin
into /apps/fs510/tktools/ (after making a copy of the one there).
doug
On 11/5/12 5:00 PM, Eric Cunningham wrote:
[e4fs@cluster bin]$ ls -l `which tkregister2.bin`
-rwxr-xr-- 1 jsadinol fs 21663433 May 22 2011 /apps/fs5
I'm not sure that was the right thing to do. There should be two files:
tkregister2 and tkregister2.bin. tkregister2 is just a script that calls
tkregister2.bin after setting up some environment variables. Try keeping
the original file name.
doug
On 11/05/2012 03:43 PM, Eric Cunningham wrote:
>
are you sure you are using the new version?
On 11/05/2012 02:38 PM, Eric Cunningham wrote:
> tried the new version, and it errored out at the same step
>
> ERROR: Option --lta-inv unknown
>
> thanks again for your help!
>
> On Mon, Nov 5, 2012 at 8:16 AM, Douglas N Greve
> mailto:gr...@nmr.mgh.ha
Try using this version
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/tkregister2.bin
copy it into $FREESURFER_HOME/bin (but make a back up of the existing
tkregister2.bin first!)
doug
On 11/02/2012 03:58 PM, Eric Cunningham wrote:
> Hi folks,
> In previous threads, the command pr
Hi folks,
In previous threads, the command provided to check the talairach.lta is...
tkregister2 --mov $FREESURFER_HOME/average/RB_all_2008-03-26.gca \
--targ ../brainmask.mgz --lta-inv talairach.lta --reg
talairach.lta.reg.dat \ --surfs --s $subject
When I try to run this command, I run into t
