Re: [Freesurfer] bug report tracula stage 2

2011-08-19 Thread Anastasia Yendiki
Hi Knut - What are the permissions of this file? One thing you could try is to run bedpostx on /media/Elements/freesurfer/dti/1/dtsave/1/dmri directly from the command line instead of through trac-all and see if that works (monitor is a script that bedpostx launches that prints to the screen t

[Freesurfer] bug report tracula stage 2

2011-08-19 Thread Knut J Bjuland
Hi I have started to run tracula on my own data. However when I run the second stage I get this erros bedpostx_seychelles: line 260: /media/Elements/freesurfer/dti/1/dtsave/1/dmri.bedpostX/monitor: Permission denied. I have tried running is as root as well but it did not help. Is there anythin