Hi Doug,
yes. and i narrowed it down:
asegstats2table can deal with non-subjects (fsaverage, qdec), unless it is the
*first item* in the list. If they are somewhere in between, they are just
skipped, with a meaningful message.
Anyway, my bad for not sanitizing the list, it previously (v5.1) wo
Hi Andreas, fsaverage does not have stats files so should cause it to
crash. Are you saying that if you sort it in a certain way, you can get
it to run with fsaverage?
doug
On 04/24/2013 09:51 AM, Andreas Berger wrote:
> Hi Surfers,
>
> as of version 5.2, i'm getting an error using asegstats2t
Hi Surfers,
as of version 5.2, i'm getting an error using asegstats2table, depending on
how i sort the subjects:
andreas@psy058:~$ asegstats2table --subjects $(ls $SUBJECTS_DIR | sort -t _ -k
1 -nk 2) -t segstats.csv --skip -d comma
SUBJECTS_DIR : /mnt/raid/freesurfer/subjects
Parsing the .sta
