,
Daria
From: Douglas N Greve [gr...@nmr.mgh.harvard.edu]
Sent: Tuesday, July 16, 2013 11:20 AM
To: Boratyn, Daria A.
Cc: Freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Xhemi question
Hi Daria, I'm not sure what you are trying to do. What do you
-
From: Douglas N Greve
mailto:gr...@nmr.mgh.harvard.edu>>
Date: Fri, Jun 7, 2013 at 1:31 PM
Subject: Re: [Freesurfer] Xhemi question
To: Daria Boratyn
mailto:bora...@nmr.mgh.harvard.edu>>,
"Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu>"
Hi Daria, I would smooth the left and right separately, then compute the LI.
doug
On 07/01/2013 01:14 PM, Boratyn, Daria A. wrote:
> Hi Doug,
>
> Could you please clarify when you suggest it's best to smooth if using the
> xhemi scripts? I'm a bit confused based on the emails below.
> http://www
Hi Doug,
Could you please clarify when you suggest it's best to smooth if using the
xhemi scripts? I'm a bit confused based on the emails below.
http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg27761.html
Thank you,
Daria
From: Douglas N Gr
Hi Daria, this is not something you would do with tkregister. First, you
need to map the curvature from the individual subject to fsaverage_sym.
You can do this for all subjects in your group with a call to
mris_preproc; spec --meas curv instead of --meas thickness. Then load
this as an overla
Hi Doug,
I've tried using tkregister2 and registering my individual subject's T1 to the
fsaverage_sym but it hasn't worked. Could you point me to the correct movable
volume and register.dat files that I should use? I'm not sure what they print
out as.
Thank you,
Daria
___
Hi Daria, the only way is to map the individual curvature to the group
space (fsaverage_sym) and see if the curvatures seem to align.
doug
ps. Please post questions to the FreeSurfer list. Thanks!
On 06/07/2013 11:13 AM, Daria Boratyn wrote:
> Hi Doug,
>
> We are experimenting with adding x
