Hi Daria, this is not something you would do with tkregister. First, you need to map the curvature from the individual subject to fsaverage_sym. You can do this for all subjects in your group with a call to mris_preproc; spec --meas curv instead of --meas thickness. Then load this as an overlay with fsverage sym and see if the curvature patterns matchup.
doug On 6/13/13 2:05 PM, Boratyn, Daria A. wrote: > Hi Doug, > > I've tried using tkregister2 and registering my individual subject's T1 to > the fsaverage_sym but it hasn't worked. Could you point me to the correct > movable volume and register.dat files that I should use? I'm not sure what > they print out as. > > Thank you, > Daria > > ________________________________________ > From: Douglas N Greve [gr...@nmr.mgh.harvard.edu] > Sent: Friday, June 07, 2013 1:31 PM > To: Daria Boratyn; Freesurfer@nmr.mgh.harvard.edu > Subject: Re: Xhemi question > > Hi Daria, the only way is to map the individual curvature to the group > space (fsaverage_sym) and see if the curvatures seem to align. > doug > > ps. Please post questions to the FreeSurfer list. Thanks! > > > > > > On 06/07/2013 11:13 AM, Daria Boratyn wrote: >> Hi Doug, >> >> We are experimenting with adding xhemi to our processing stream. Is there >> is a way to QC the results at an individual subject level? >> >> Best, >> Daria >> >> >> Daria A. Boratyn, >> Clinical Research Coordinator >> MS Imaging Lab >> Massachusetts General Hospital >> 149 13th Street | Boston, MA 02129 >> 617-726-7531 >> >> > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
