Re: [Freesurfer] V1 prediction

2011-03-15 Thread Bruce Fischl
Hi Thomas, there is a tksurfer menu item to transfer the label stat field to an overlay, and you can go from there. cheers Bruce On Tue, 15 Mar 2011, Thesen, Thomas wrote: > Dear Freesurfer List, > > I ran the script for predicting V1 location on the surface: > http://surfer.nmr.mgh.harvard.ed

Re: [Freesurfer] V1 prediction

2011-03-15 Thread Douglas N Greve
In tksurfer, try going to Tools->Label->Threshold Selected Label. Then choose a threshold between 0 and 1. doug Thesen, Thomas wrote: > > Dear Freesurfer List, > > I ran the script for predicting V1 location on the surface: > > http://surfer.nmr.mgh.harvard.edu/fswiki/V1 > > According to the pape

[Freesurfer] V1 prediction

2011-03-15 Thread Thesen, Thomas
Dear Freesurfer List, I ran the script for predicting V1 location on the surface: http://surfer.nmr.mgh.harvard.edu/fswiki/V1 According to the paper, the output should be a probability map, but the script only seems to produce a label file: $SUBJECT_DIR/label/?h.v1.prob.label . When I load this