Re: [Freesurfer] Total brain volumes

2017-03-01 Thread Douglas Greve
See if this page will answer your questions https://surfer.nmr.mgh.harvard.edu/fswiki/MorphometryStats On 3/1/17 12:39 AM, Daniel Wen wrote: Dear Freesurfer experts, I am new to using freesurfer and was wondering if anyone could explain to me the difference in output generated by BrainSegVo

[Freesurfer] Total brain volumes

2017-02-28 Thread Daniel Wen
Dear Freesurfer experts, I am new to using freesurfer and was wondering if anyone could explain to me the difference in output generated by BrainSegVolNotVent and BrainSegVolNotVentSurf. I am aware that BrainSegVolNotVent refers to the Brain Segmentation Volume Without Ventricles and BrainSegVo

RE: [Freesurfer] total brain volumes

2009-04-13 Thread Dankner, Nathan (NIH/NIMH) [F]
d.edu] Sent: Mon 4/13/2009 2:42 PM To: Douglas N Greve Cc: Dankner, Nathan (NIH/NIMH) [F]; freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] total brain volumes probably partial volume correction, which is a good thing to do. On Mon, 13 Apr 2009, Douglas N Greve wrote: > No

Re: [Freesurfer] total brain volumes

2009-04-13 Thread Bruce Fischl
From: Douglas N Greve [mailto:gr...@nmr.mgh.harvard.edu] Sent: Mon 4/13/2009 11:42 AM To: Dankner, Nathan (NIH/NIMH) [F] Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] total brain volumes Did you look at the Brain Volume wiki page? To find it, go to our wiki and type in "BrainS

Re: [Freesurfer] total brain volumes

2009-04-13 Thread Douglas N Greve
IH/NIMH) [F] Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] total brain volumes Did you look at the Brain Volume wiki page? To find it, go to our wiki and type in "BrainSegVol" in the search box and hit the "Text" button. doug Dankner, Nathan (NIH/NIMH) [F] wrote

RE: [Freesurfer] total brain volumes

2009-04-13 Thread Dankner, Nathan (NIH/NIMH) [F]
1:42 AM To: Dankner, Nathan (NIH/NIMH) [F] Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] total brain volumes Did you look at the Brain Volume wiki page? To find it, go to our wiki and type in "BrainSegVol" in the search box and hit the "Text" button. doug Dankne

Re: [Freesurfer] total brain volumes

2009-04-13 Thread Douglas N Greve
ize if this has been answered already. If the information is available elsewhere and I happened to miss it, please let me know. -Original Message- From: Dankner, Nathan (NIH/NIMH) [F] Sent: Thu 4/9/2009 1:55 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] total brain volum

Re: [Freesurfer] total brain volumes

2009-04-13 Thread Bruce Fischl
Thu 4/9/2009 1:55 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] total brain volumes I am looking to derive total brain volume measures from the data that I have. Judging by reading previous posts, it seems that BrainSegVol in aseg.stats includes cerebellum and ventricles. Is there

[Freesurfer] total brain volumes

2009-04-13 Thread Dankner, Nathan (NIH/NIMH) [F]
/2009 1:55 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] total brain volumes I am looking to derive total brain volume measures from the data that I have. Judging by reading previous posts, it seems that BrainSegVol in aseg.stats includes cerebellum and ventricles. Is there any way

[Freesurfer] total brain volumes

2009-04-09 Thread Dankner, Nathan (NIH/NIMH) [F]
I am looking to derive total brain volume measures from the data that I have. Judging by reading previous posts, it seems that BrainSegVol in aseg.stats includes cerebellum and ventricles. Is there any way to eliminate these from the calculation? Is it kosher to subtract the cerebellum/ventri