Re: [Freesurfer] Total volumes SAMSEG

2021-10-31 Thread Douglas N. Greve
That is what I would do. The FS WM volumes are computed using the surface, so it will be more accurate (and probably a little bigger) On 10/29/2021 3:59 AM, Nederpelt, D.R. van (David) wrote: External Email - Use Caution External Email - Use Caution Dear SAMSEG developers, I

[Freesurfer] Total volumes SAMSEG

2021-10-29 Thread Nederpelt, D.R. van (David)
External Email - Use Caution Dear SAMSEG developers, Is there an easy way/specific function to compute the total volumes (GM, WM and Total Brain) after the cross sectional processing pipeline has been run? I currently add the volumes specified here: MorphometryStats - Free Surfer

Re: [Freesurfer] Total Volumes

2006-06-28 Thread Doug Greve
Not sure, but probably Aug or Sept (that'd be 6mo after the prev stable). doug Ajith Kumar U wrote: Thank you for the response. I may be overly forthcoming here, but when will the next stable release be available. Aju  On Thu, 29 Jun 2006 Doug Greve wrote : > >We are still evalu

Re: Re: [Freesurfer] Total Volumes

2006-06-28 Thread Ajith Kumar U
Thank you for the response. I may be overly forthcoming here, but when will the next stable release be available. Aju  On Thu, 29 Jun 2006 Doug Greve wrote : > >We are still evaluating it, but it should be ready by our next stable release. > >doug > > > >Bruce Fischl wrote: > >>Doug put toge

Re: [Freesurfer] Total Volumes

2006-06-28 Thread Doug Greve
We are still evaluating it, but it should be ready by our next stable release. doug Bruce Fischl wrote: Doug put together a white matter parcellation that does this kind of thing, but I'm not sure what the status of it is. Doug? On Wed, 28 Jun 2006, Ajith Kumar U wrote: What I mean is,

Re: Re: [Freesurfer] Total Volumes

2006-06-28 Thread Bruce Fischl
Doug put together a white matter parcellation that does this kind of thing, but I'm not sure what the status of it is. Doug? On Wed, 28 Jun 2006, Ajith Kumar U wrote: What I mean is, for example, the total volume of Heschl's Gyrus. This includes its gray matter and the underlying white matter

Re: Re: [Freesurfer] Total Volumes

2006-06-28 Thread Ajith Kumar U
What I mean is, for example, the total volume of Heschl's Gyrus. This includes its gray matter and the underlying white matter. I understand that the wm boundary would be difficult to compute but even some estimates would work. Aju. On Thu, 29 Jun 2006 Bruce Fischl wrote : >what would the whi

Re: [Freesurfer] Total Volumes

2006-06-28 Thread Bruce Fischl
what would the white matter volume of a cortical region mean? On Wed, 28 Jun 2006, Ajith Kumar U wrote: Hello All, How do we obtain the total volumes(gray+white) of certain regions. In ?.aparc.stats, I can find the gray matter volumes but not total volumes. Is this in some other file? Than

[Freesurfer] Total Volumes

2006-06-28 Thread Ajith Kumar U
Hello All, How do we obtain the total volumes(gray+white) of certain regions. In ?.aparc.stats, I can find the gray matter volumes but not total volumes. Is this in some other file? Thanks, Aju. ** Mr.Ajith Kumar U Junior Research Fellow,