External Email - Use Caution Dear SAMSEG developers,
Is there an easy way/specific function to compute the total volumes (GM, WM and Total Brain) after the cross sectional processing pipeline has been run? I currently add the volumes specified here: MorphometryStats - Free Surfer Wiki (harvard.edu)<https://secure-web.cisco.com/1TiZSqlkmJdSG6YomLyN1O5wCUsd9cdQzzIoKCQYS9WpviPI49_lorZ_PTx-cok1PIeuP8aWJ0IV6NMrcGfHODM2PLpH9RCWg-ln0Jg3_V6zwsh77nVZB4eIAR3Y-sri82P9wc_X4NwGgnapiZ_giZMZuqHSwm3ql2xGpURyF3CTBTmybLP1w9Cv7SbWp2TZhZkZnRB9yYZHo-e9S5TPVgg_igr4Am5G0FC_cGgwpO0coHVaAsMKqmpERVazbMNtYaLa3U6l0NChbwkbKfwL0wA/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FMorphometryStats> However, adding the WM volumes (lhCerebralWhiteMatter + rhCerebralWhiteMatter + WM hypointensities) results in lower volumesthan the volumes found with FreeSurfer. Thank you very much in advance! Best regards, David [cid:image002.png@01D40E30.3E299A80] David van Nederpelt, MSc. | PhD Candidate Radiology and Nuclear Medicine Amsterdam UMC, Location VUmc | PK -1 X 004 | De Boelelaan 1118, 1081 HZ Amsterdam, the Netherlands T: +31 20 444 6480 | E: d.vannederp...@amsterdamumc.nl<mailto:d.vannederp...@amsterdamumc.nl> http://secure-web.cisco.com/1EOtsCiWTwBLCVMkC2cEggLJndUZQC9bJDTTa84lDglqlKV1NSwYodWX7XlV-SG0XwfIcxv0IxT7ZdNveJb6r-mbJXhdeCMr55JKyVRHZey6Bs_ZPGVlfqgp4m3eK0LbpITXSbjMzJxjFO9d0yfpyqY0q9aYngHjAOKVypJkS3kVdS2sieUBwBcd41N_XqBqrC7cFqoKtSFe9byCgMMDl7CC3V0umdoBwjmE6W1YiOK6E7hTFWgnwQvk5TyfGwN8lSOja2-aGJqnkfuenor0P6g/http%3A%2F%2Fwww.amsterdamumc.nl<http://secure-web.cisco.com/1adKHUXOwhS5An078rgDU8DhS5pGcVaF-bemoEwstJMOWdVUabumeQt88QmkYwOE3kfCZ-8_lvjT1X1-V1Eo6AXJ89-inf3J7_8Hq7ap-lsWJJ7CdjvSv_uktM_FCq9q5EXLZqluOtUJYH7r2lT81W4rNoyLexrlFs6yKzvswB9Qg6zE-qU-gOTrZffItevTNkm6Ooq0nTvN3BEC5QZyuQWyItVe3n6kWyzrThd3oC_9paZLP3Am-gKokAHogtYsk_0mXns8AXZjrlbNfwIXWqA/http%3A%2F%2Fwww.amsterdamumc.nl%2F> | http://secure-web.cisco.com/1MykofUmqPylr7OSHojIjyyuz3FqKchVPIVM4VJj6JPJzvTN0-mQMXOJ3C-J3ug2mqOGNMKmbEQm3XyTXdoDd9_SlgR0Ep6NArs8mlMAf3LQVo2qraIJGRw3kZEemzlJcbMmoIfeWZn6FNhTLKowEKS-qq6Tvm50v2klwCAAvZZdHVa-dqybhdSx8JHk-tKIYpWkRmP5mEMKBZAe1wbodG3fjUZW37dcOMOu4XzZpQs-NX3l4X8fF_Nc4pHfevkUyUMdufti8Eptnmk2Eb3ovlg/http%3A%2F%2Fwww.vumc.nl<http://secure-web.cisco.com/1gpC425-YWhlfpRlTm0wPHu3H0yqPdczn6ZxyBZtVEFl5ebUfb06uOCJwi35aZzHN6tlHjOK_3iobh7nfKG7LJmH02eBZ7IDgEAwbrVAcTyBasa_68FddVYpW3crTDqp7RS58h8FuSRlik4bK217MDJ4OzwUFs4FSssz1TWot_wMqA2YHJ9iWExQWqemeLlzVKBUaiciX09g7D-MAysTlyTbEYuhIsuADj-Kx7tGXYFiCEIn1wizGeHsYt6kAhRGVnpx1Ut9IVVB8Zt4kx-s96A/http%3A%2F%2Fwww.vumc.nl%2F> / http://secure-web.cisco.com/1IDr1ToLQ00j-N7JGdkZizZ2EY4BfRaX-Ni0bhB33BkT_pJtmXKSQPSMX7LC04i3XB25FIoQpS4c_HfkEnw0O4HnZHVeFZnjWlyvnLDpUtZEiNM6HuERtm38DavT5BeAk0oe-wdTltFJz-I_5X7zeKtdUCpEzNaVBHAWUanrgYP9J2kmbUAB5nit7Tc82Zn-yHVegPRrVelTY4YQXRQMrxKdxnk5ISJ8uEz9Is_0f1yW5wTAXW64kL_J69XAWvjftdLIPyEGnAaBwomnxBjlrUw/http%3A%2F%2Fwww.amc.nl<http://secure-web.cisco.com/1wXJqt2HAZw1ZuD0nu0MtMhTFzaeK7O7CKFnLDqQmLsmS7l58-5sLp7UrEJJotSs2KHUEEDV0wnmawamcCbpdNxUYXyFRDmrCfVvAXYfn1z-X9oG_nKEEFfwxmSVlx3I2kiIhTAkw9tUfJaxHxMIJ8gpAVRPW_bFZUlAPQio1cFqorbuXJ4Jfho8WDOlD0apweEUKAcB6GHhQNmK-dB4Hmj7e_xkh5FcgWtJxGKnfr6Co4r4i8Y7WkBy0rslsakHVrM6fP8pup9FvmcHEnjwcSg/http%3A%2F%2Fwww.amc.nl%2F> ______________________________________________________ ______________________________________________________ VUmc disclaimer : http://secure-web.cisco.com/13cespwJDanP8jSeJT-F5DbVhbpJ9dqA3oMmUiNIdESzfsiOaZ5m7YumRgp6Zjm7aIVK0zpIkkKD2htd1MGRvAfV3Qz-AifmRlVvJYKFwtTd3p-lK6F8VTmoBqPNDHX0-FSo9bwx3LLATKHSNG8zUoBUzd9wR9nJlhsVl1Crikn2RCExwWlz0F0X3qWYlOvibX4BDmf3UBJO8KvDOhNH8w9MDKBpDvRomaEPEIemqOSJy4L-vKVoVFjWDiJEsyQtXOQI861vPiiQUcCzIsdCZVA/http%3A%2F%2Fwww.vumc.nl%2Fdisclaimer AMC disclaimer : http://secure-web.cisco.com/1-TwAPrU-0Wch-3LbY82fTZ4s74MTy5spCul9ZUUp4f7Au_YAkf1CmsXix0ktJld8n9ONam_AJhsk5Hpb34Ijqg17AONY0YReO6btXKnbkKI0mozcxTh7v-PV1920a9FVJdZh84sUGtEZI9RYRlz9o5vc_1jINAnRPqa42VOGmp5NvH2PF6HbcLd7CucrphF2RKzWWEDNydIMjvwZsppIMF0GuljhTet2MpVre2KTWW9hGSzzEjFX-gtvXkXNS3NyqJvJHJYoGUlrh_nsDlQWfw/http%3A%2F%2Fwww.amc.nl%2Fdisclaimer
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