Re: [Freesurfer] Thickness vertex by vertex

2013-08-28 Thread Giusy Chinnici
Thanks all, I did it :) Cheers Giusy Inviato da iPhone Il giorno 28/ago/2013, alle ore 18:40, Avram Holmes ha scritto: > check the .vol values I think they should match those from read_curv. > > Avram > > > On Wed, Aug 28, 2013 at 11:37 AM, Giusy Chinnici > wrote: >> Thanks all, >> >> I

Re: [Freesurfer] Thickness vertex by vertex

2013-08-28 Thread Bruce Fischl
you can use read_label and the first column (+1) for the indices Bruce On Wed, 28 Aug 2013, Giusy Chinnici wrote: Thanks all, I opened the file subj/surf/?h.thickness with MATLAB using the function read_curv(subj/surf/lh.thickness). I obtained a vector with dimensions nverticesX1, but I need

Re: [Freesurfer] Thickness vertex by vertex

2013-08-28 Thread Avram Holmes
Giusy, You can access vertex level info in Matlab with MRIread('SUBJECT.FILENAME'). Avram On Wed, Aug 28, 2013 at 8:42 AM, Giusy Chinnici wrote: > Dear all, > > Is there available a function that, given a certain ROI, returns per > vertex thickness (not the average thickness)? > > Thanks > Che

Re: [Freesurfer] Thickness vertex by vertex

2013-08-28 Thread Bruce Fischl
you mean only within that ROI? I don't think so, but this would be pretty easy in matlab On Wed, 28 Aug 2013, Giusy Chinnici wrote: > Dear all, > > Is there available a function that, given a certain ROI, returns per vertex > thickness (not the average thickness)? > > Thanks > Cheers > > Giusy C

[Freesurfer] Thickness vertex by vertex

2013-08-28 Thread Giusy Chinnici
Dear all, Is there available a function that, given a certain ROI, returns per vertex thickness (not the average thickness)? Thanks Cheers Giusy Chinnici ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mail