Re: [Freesurfer] T-value intensity overlayed onto 2009 Destrieux Parcellations

2012-08-15 Thread j janssen
Hi, not 100% sure what you want but perhaps this: http://brainder.org/2011/07/05/freesurfer-brains-in-arbitrary-colours is what you're looking for? -joost On Tue, Aug 14, 2012 at 11:13 PM, Douglas N Greve wrote: > Try touching ?h.orig.nofix, ie, > touch rh.orig.nofix lh.orig.nofix > > th

Re: [Freesurfer] T-value intensity overlayed onto 2009 Destrieux Parcellations

2012-08-14 Thread Douglas N Greve
Try touching ?h.orig.nofix, ie, touch rh.orig.nofix lh.orig.nofix then re-running with -make all doug On 08/14/2012 05:08 PM, David Vazquez wrote: > > Hi, > > We would like to visually display some t-values onto a brain using the > 2009 Destrieux freesurfer parcellations. We have our own t-val

[Freesurfer] T-value intensity overlayed onto 2009 Destrieux Parcellations

2012-08-14 Thread David Vazquez
Hi, We would like to visually display some t-values onto a brain using the 2009 Destrieux freesurfer parcellations. We have our own t-values for each parcellation. We would like to display a color-coded spm map for all parcellations, and would like each parcellation to represent the same intensi