You can't run mri_glmfit-sim on ROI output. mri_glmfit-sim is for
correcting multiple comparisons on maps. For ROIs, you'll have to leave
them uncorrecrted or correct with Bonferonni or FDR. In theory, you
could use permutation.
On 6/30/2020 9:54 PM, Martin Juneja wrote:
External Ema
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Dear Doug,
Thanks for your quick response.
I am now able to get roifile (i.e., Volume_Subcortical) from
asegstats2table, which shows cortical volume values of all the
subcortical regions. Next when I run:
mri_glmfit --table Volume_Subcortical --fsgd
On 6/29/2020 8:45 PM, Martin Juneja wrote:
External Email - Use Caution
Hello experts,
I am following these instructions
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis to
analyze the association between IQ and whole brain cortical thickness
of brain areas (whic
External Email - Use Caution
Hello experts,
I am following these instructions
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis to
analyze the association between IQ and whole brain cortical thickness of
brain areas (which by default uses Desikan atlas of 34 regio
