Re: [Freesurfer] Snowy background for T1 images

2010-06-09 Thread Sita Kakunoori
Hi Dave, 001.mgz in /mri/orig/ looks okay but 002.mgz looks strange, which I think is the reason for what you are seeing in T1.mgz. Did you collect 2 runs for structurals. Can you point me to the dicom files for this dataset or the scan log. Sita. On Wed, 9 Jun 2010, Dave Brohawn wrote: >

[Freesurfer] Snowy background for T1 images

2010-06-09 Thread Dave Brohawn
Hello, I keep seeing a snowy background for my T1 structural images. Here is my info: FREESURFER_HOME: /usr/local/freesurfer/stable4 Build stamp: freesurfer-Linux-centos4-stable-v4.5.0-20100311 RedHat release: CentOS release 5.3 (Final) Kernel info: Linux 2.6.18-128.7.1.el5 i686 NMR Center i