Hi Inge,
if you just rerun recon-all with the orig as input it should work. It will
skip the motion correction if you give it only a single volume.
cheers,
Bruce
On Fri, 6 Jul 2007, Inge K. Amlien
wrote:
Thanks,
for the first study I converted the COR-files (residing in mri/orig/00*/)
to
Thanks,
for the first study I converted the COR-files (residing in mri/orig/00*/)
to mri/orig/001.mgz and 002.mgz and ran recon-all as normal.
For the second study, are the COR-files residing in folder mri/orig/COR-*
equal to orig.mgz in 3.05? Is it ok to convert to mgz and run recon-all
with -nom
you should be able to use COR files as input
On Tue, 3 Jul 2007, Inge K.
Amlien wrote:
Hi,
we are about to reprocess quite a few subjects originally done in 2004. I
am wondering if I will need to dig up the original dicoms, or if I can
convert the COR-files to .mgz.
-In the first study we hav
Hi,
we are about to reprocess quite a few subjects originally done in 2004. I
am wondering if I will need to dig up the original dicoms, or if I can
convert the COR-files to .mgz.
-In the first study we have 2 series converted to orig/001/COR* and
orig/002/COR*.
-In the second study we have only 1
