there is a typo: it should be "-autorecon2" not "-autrecon2"
cheers
Bruce
On Mon, 22 May
2017, Gwang-Won Kim wrote:
Hello FreeSurfer Developers,
I saw UserContributions/FAQ of FreeSurfer as following:
Q. I have already skull-stripped data. Can I submit it to
recon-all?
A: If your skull-
[mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Gwang-Won Kim
Sent: Monday, May 22, 2017 7:44 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Recon-all error: -autrecon2 unrecognized
Hello FreeSurfer Developers,
I saw UserContributions/FAQ of FreeSurfer as following:
Q. I
Hello FreeSurfer Developers,I saw UserContributions/FAQ of FreeSurfer as following:Q. I have already skull-stripped data. Can I submit it to recon-all?A: If your skull-stripped volume does not have the cerebellum, then no. If it does, then yes, however you will have to run the data a bit differentl