Re: [Freesurfer] Recon-all error: -autrecon2 unrecognized

2017-05-22 Thread Bruce Fischl
there is a typo: it should be "-autorecon2" not "-autrecon2" cheers Bruce On Mon, 22 May 2017, Gwang-Won Kim wrote: Hello FreeSurfer Developers, I saw UserContributions/FAQ of FreeSurfer as following: Q. I have already skull-stripped data. Can I submit it to recon-all? A: If your skull-

Re: [Freesurfer] Recon-all error: -autrecon2 unrecognized

2017-05-22 Thread Krieger, Donald N.
[mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Gwang-Won Kim Sent: Monday, May 22, 2017 7:44 AM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Recon-all error: -autrecon2 unrecognized Hello FreeSurfer Developers, I saw UserContributions/FAQ of FreeSurfer as following: Q. I

[Freesurfer] Recon-all error: -autrecon2 unrecognized

2017-05-22 Thread Gwang-Won Kim
Hello FreeSurfer Developers,I saw UserContributions/FAQ of FreeSurfer as following:Q. I have already skull-stripped data. Can I submit it to recon-all?A: If your skull-stripped volume does not have the cerebellum, then no. If it does, then yes, however you will have to run the data a bit differentl