Re: [Freesurfer] Re: error loading shared libraries & retinotopy

2005-12-16 Thread Jane Aspell
hi again after installing: itcl-3.2-88.i386.rpm tix-8.1.4-88.i386.rpm tkmedit and tksurfer are now working, thanks. if anyone knows about interpreting the colour codes produced by retinotopy analysis in FsFast please let me know! thanks Jane In message <[EMAIL PROTECTED]> Nick Schmansky <[EM

Re: [Freesurfer] Re: error loading shared libraries & retinotopy

2005-12-14 Thread Nick Schmansky
Jane, Concerning the libraries libitk3.2.so and libitcl3.2.so, Freesurfer does not use these libraries any more (I think the older -20040218 release did, however). Do you have the environment variable ITCL_LIBRARY defined in your startup .cshrc file? You can test if it is set by typing (in csh o

Re: [Freesurfer] Re: error loading shared libraries & retinotopy

2005-12-12 Thread Jane Aspell
hi nick when i type >ldd `which tkmedit` i get the ouput pasted below this email. libitk3.2.so and libitcl3.2.so are not found - could be the problem? uncommenting 'source ${FSL_DIR}/etc/fslconf/fsl.csh' in FreeSurferEnv.csh (and typing 'unsetenv TCLLIBPATH') had no effect. an earlier version of

Re: [Freesurfer] Re: error loading shared libraries

2005-12-05 Thread Nick Schmansky
Jane, This is an unusual error, since tkmedit and tksurfer do not use the ITK library. To figure out how libitk3.2.so is being referenced, can you send me the output of this command: ldd `which tkmedit` I suspect there is some conflict between the FSL setup and Freesurfer, as FSL does use ITK

Re: [Freesurfer] Re: error loading shared libraries

2005-12-05 Thread Nick Schmansky
Jane, This is an unusual error, since tkmedit and tksurfer do not use the ITK library. To figure out how libitk3.2.so is being referenced, can you send me the output of this command: ldd `which tkmedit` I suspect there is some conflict between the FSL setup and Freesurfer, as FSL does use ITK

[Freesurfer] Re: error loading shared libraries

2005-12-05 Thread Jane Aspell
hi i installed a newer version of freesurfer (using download freesurfer-Linux-rh9-v2.2.tar.gz) but when i try and run tkmedit or tksurfer i get the error: "error while loading shared libraries: libitk3.2.so: cannot open shared object file: No such file or directory" this is my output when i sour