>> directory that contains the following lines:
>>>
>>>
>>> MEASURE1 = long.thickness-avg
>>> MEASURE2 = long.thickness-rate
>>> MEASURE3 = long.thickness-pc1
>>> MEASURE4 = long.thickness-spcYou can then run qdec and do all kinds of
>>
qdec/cross.qdec.table.datBest, Martin- Original
> > Message -
> > From: "Alex Hanganu"
> > To: "Martin Reuter"
> > Cc: "FS Mailing List"
> > Sent: Friday, November 09, 2012 9:47 PM
> > Subject: Re: [Freesurfer] Qdec - longitudina
can then run qdec and do all kinds of
> > analysis on any of those files and other variables from the qdec table:
> >
> > qdec --table ./qdec/cross.qdec.table.datBest, Martin- Original
> > Message -
> > From: "Alex Hanganu"
> > To: "Marti
; qdec --table ./qdec/cross.qdec.table.datBest, Martin- Original
> Message -
> From: "Alex Hanganu"
> To: "Martin Reuter"
> Cc: "FS Mailing List"
> Sent: Friday, November 09, 2012 9:47 PM
> Subject: Re: [Freesurfer] Qdec - longitudinal. File missin
Subject: Re: [Freesurfer] Qdec - longitudinal. File missing
> Hello Martin, thanks for your answer,
>
> I used the --qcache. The cmd was:
>
> long_mris_slopes --qdec qdecfile --meas thickness --hemi
> lh --do-avg --do-rate --do-pc1 --do-spc --do-stack --do-label --time
> months --fwhm
Hello Martin, thanks for your answer,
I used the --qcache. The cmd was:
long_mris_slopes --qdec qdecfile --meas thickness --hemi lh --do-avg
--do-rate --do-pc1 --do-spc --do-stack --do-label --time months --fwhm
10 --qcache fsaverage --sd SUBJECTS_DIR
All the bases subjects have the specific f
Hi Alex,
check the bases of other subjects. Are there any fwhmfsaverage
files?
Did you run with the --qcache flag? Then these should have been created.
Maybe you passed a specific fwhm value different from 10?
Best, Martin
On Fri, 2012-11-09 at 17:13 -0500, Alex Hanganu wrote:
> Dear FreeSu
Dear FreeSurfer Experts,
we performed the long_mris_slopes cmd and finished without error.
According to the "Longitudinal Processing Tutorial", we created after
that the cross sectional form of the qdec table, and then the
qdec/.Qdecrc file.
When running the qdec analyses, we receive an error:
