Re: [Freesurfer] Problem with longitudinal processing (MS lesions/samseg)

2022-08-28 Thread Douglas N. Greve
, Stefano *Betreff:* Re: [Freesurfer] Problem with longitudinal processing (MS lesions/samseg) On 6/20/2022 3:03 AM, Wittayer, Matthias wrote: *External Email - Use Caution * Hi, thanks for your answer. Yes I did the longitudinal runs using the base as described in the

Re: [Freesurfer] Problem with longitudinal processing (MS lesions/samseg)

2022-08-26 Thread Wittayer, Matthias
arvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu> Betreff: Re: [Freesurfer] Problem with longitudinal processing When you say they are growing rather than shrinking, do you mean in the longitudnial recon-all run? The reason I ask is that you only mention the base and cross. When you do the lon

Re: [Freesurfer] Problem with longitudinal processing (MS lesions/samseg)

2022-06-24 Thread Douglas N. Greve
*Von:* freesurfer-boun...@nmr.mgh.harvard.edu im Auftrag von Douglas N. Greve *Gesendet:* Sonntag, 19. Juni 2022 16:58:18 *An:* freesurfer@nmr.mgh.harvard.edu *Betreff:* Re: [Freesurfer] Problem with longitudinal processing When you say they are growing rather than shrinking, do you mean in the lo

Re: [Freesurfer] Problem with longitudinal processing

2022-06-20 Thread Wittayer, Matthias
...@nmr.mgh.harvard.edu im Auftrag von Douglas N. Greve Gesendet: Sonntag, 19. Juni 2022 16:58:18 An: freesurfer@nmr.mgh.harvard.edu Betreff: Re: [Freesurfer] Problem with longitudinal processing When you say they are growing rather than shrinking, do you mean in the longitudnial recon-all run? The

Re: [Freesurfer] Problem with longitudinal processing

2022-06-19 Thread Douglas N. Greve
When you say they are growing rather than shrinking, do you mean in the longitudnial recon-all run? The reason I ask is that you only mention the base and cross. When you do the longitudinal analysis, you need to do cross, then base, then long. On 6/15/2022 11:43 AM, Wittayer, Matthias wrote:

[Freesurfer] Problem with longitudinal processing

2022-06-15 Thread Wittayer, Matthias
External Email - Use Caution Dear community, I tried to process MS- patient's MRIs (mostly same scanner, same settings) Longitudinally over a long period of time. I first processed all timeponits crosssectionally and then initialised the base image by recon- all - base TP1 TP2