Re: [Freesurfer] Problem running recon-all in newly installed Ubuntu 16.04LTS

2016-12-07 Thread Nasos Petridis
Hi Bruce, Many thanks. The PC has nominally 8Gb of RAM. The recon-all.log gives the following totalusedfree shared buff/cache available Mem:8142944 1081848 6041324 44260 1019772 6725212 Swap: 8353788

Re: [Freesurfer] Problem running recon-all in newly installed Ubuntu 16.04LTS

2016-12-07 Thread Bruce Fischl
Hi Nasos how much RAM is on your new PC? cheers Bruce On Wed, 7 Dec 2016, Nasos Petridis wrote: > Hello freesurfer experts, > > I've recently set up a PC running Ubuntu 16.04LTS and tried to run a > freesurfer version which was running well on another PC (also running > Ubuntu 16.04LTS)...the ni

[Freesurfer] Problem running recon-all in newly installed Ubuntu 16.04LTS

2016-12-07 Thread Nasos Petridis
Hello freesurfer experts, I've recently set up a PC running Ubuntu 16.04LTS and tried to run a freesurfer version which was running well on another PC (also running Ubuntu 16.04LTS)...the nightly build for centos6 of 2016-09-03. I'm running the recon-all script. While running mri_ca_register, I