Hi Nasos how much RAM is on your new PC?
cheers Bruce On Wed, 7 Dec 2016, Nasos Petridis wrote: > Hello freesurfer experts, > > I've recently set up a PC running Ubuntu 16.04LTS and tried to run a > freesurfer version which was running well on another PC (also running > Ubuntu 16.04LTS)...the nightly build for centos6 of 2016-09-03. I'm > running the recon-all script. While running mri_ca_register, I get > > >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> > > label assignment complete, 7 changed (0.00%) > det(m_affine) = 1.19 (predicted orig area = 6.7) > label assignment complete, 8 changed (0.00%) > Segmentation fault (core dumped) > ERROR: mri_ca_register with non-zero status 139 > but continuing despite the error > >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> > > and a little bit later the program exits. > > Comparing the recon-all.log files from the runs in the two PCs, they > appear identical until the above error appears, with the exception of > the "main basin size", where the problematic PC gives a value which is > 3.5% of that in the "good" PC. > > Any idea what may be going wrong with the new PC? > > Many thanks, > > Nasos > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
