Re: [Freesurfer] Pial boundaries

2013-02-22 Thread Bruce Fischl
That's hard as I'll just be guessing. What is the intensity of the wm just inside the white surface where you are missing pial? And why can't you send an image? Cheers Bruce On Feb 21, 2013, at 11:11 AM, melinaki p-t wrote: > I am afraid I can't... > Can you give any advise without pictures?

Re: [Freesurfer] Pial boundaries

2013-02-21 Thread melinaki p-t
I am afraid I can't... Can you give any advise without pictures? Thank you in advance. Melina 2013/2/21 Bruce Fischl > Can you send us an image? > > > > On Feb 21, 2013, at 7:24 AM, melinaki p-t wrote: > > > Hello, > > > > I would like to ask if there are any commands or any manual edits I can

Re: [Freesurfer] Pial boundaries

2013-02-21 Thread Bruce Fischl
Can you send us an image? On Feb 21, 2013, at 7:24 AM, melinaki p-t wrote: > Hello, > > I would like to ask if there are any commands or any manual edits I can use > to fix the pial boundaries even if the white matter boundaries are fine. > The white matter boundaries follow the white matter

[Freesurfer] Pial boundaries

2013-02-21 Thread melinaki p-t
Hello, I would like to ask if there are any commands or any manual edits I can use to fix the pial boundaries even if the white matter boundaries are fine. The white matter boundaries follow the white matter pretty good but there is some grey matter missing at some areas. Its not a massive problem