That's hard as I'll just be guessing. What is the intensity of the wm just 
inside the white surface where you are missing pial? And why can't you send an 
image?
Cheers
Bruce



On Feb 21, 2013, at 11:11 AM, melinaki p-t <tritic...@gmail.com> wrote:

> I am afraid I can't...
> Can you give any advise without pictures?
> Thank you in advance.
> Melina
> 
> 2013/2/21 Bruce Fischl <fis...@nmr.mgh.harvard.edu>
> Can you send us an image?
> 
> 
> 
> On Feb 21, 2013, at 7:24 AM, melinaki p-t <tritic...@gmail.com> wrote:
> 
> > Hello,
> >
> > I would like to ask if there are any commands or any manual edits I can use 
> > to fix the pial boundaries even if the white matter boundaries are fine.
> > The white matter boundaries follow the white matter pretty good but there 
> > is some grey matter missing at some areas. Its not a massive problem though.
> > Thank you in advance.
> > Melina
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