On 08/30/2017 03:57 PM, Torrado Carvajal, Angel wrote:
> Hello,
>
> I need to get the segmentation of the occipital cortex. I am
> attempting to generate the corresponding ROI, using the
> mri_annotation2label command and then running mris_anatomical_stats to
> merge the labels and get the act
Hello,
I need to get the segmentation of the occipital cortex. I am attempting to
generate the corresponding ROI, using the mri_annotation2label command and then
running mris_anatomical_stats to merge the labels and get the actual volume. I
am calling mri_annotation2label as follows:
mri_annota
Hi Megha
looking at your images it's not clear to me where the gray/white boundary
is. Do you think it should be further out? One thing you can try is (if the
occipital white matter intensity in brain.mgz is <110) putting some control
points in the interior of the white matter. Or as Matt sugg
Higher than 1mm resolution helps a lot. We use 0.7mm isotropic in the HCP.
Peace,
Matt.
From: "Megha K."
Date: Monday, December 9, 2013 10:23 PM
To:
Subject: [Freesurfer] Occipital cortex segmentation
Dear Sir/Madam,
I am using freesurfer for 3T MRI analysis of visua
