Re: [Freesurfer] Obtaining single file from segmented images

2021-07-19 Thread Paul Wighton
External Email - Use Caution Hi Gregorio, You should be able to use mri_binarize to create masks from the hippocampal seg files https://secure-web.cisco.com/1qpMewyxfLa5R6eiYrzcf1qqqYJYO4CO0D3YKhBtxNKEZ97mm-iZPnbTazVbnV6aErI2Y4G6Iodqtpa7eRC6MzifD_tow_ROWRGLcJnlSoJoMvp7kVi4-NzdGcgO

[Freesurfer] Obtaining single file from segmented images

2021-07-19 Thread Gregorio Borghi
External Email - Use Caution Dear sir/madam, I have successfully segmented my participants' hippocampus thanks to "segmentHA_T2.sh" command, which provided me both right and left hippocampal segmented files. However, I was wondering if it is possible to obtain single files for eac