behalf of Bruce Fischl
[fis...@nmr.mgh.harvard.edu]
Sent: Friday, October 10, 2014 3:01 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Image normalization and pial/wm error
I don't really know, sorry. You could to an inter- and intra-rater test
by editing some of the images twice
On Fr
> [fis...@nmr.mgh.harvard.edu]
> Sent: Friday, October 10, 2014 2:30 PM
> To: Freesurfer support list
> Subject: Re: [Freesurfer] Image normalization and pial/wm error
>
> Hi Sneha
>
> then I think manually editing is your best bet (sorry)
> Bruce
>
>
> On Fri, 10
-boun...@nmr.mgh.harvard.edu
[freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Bruce Fischl
[fis...@nmr.mgh.harvard.edu]
Sent: Friday, October 10, 2014 2:30 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Image normalization and pial/wm error
Hi Sneha
then I think manually editi
iday, October 10, 2014 1:58 PM
> To: Freesurfer support list
> Subject: Re: [Freesurfer] Image normalization and pial/wm error
>
> Hi Sneha
>
> it looks like it is grabbing a bunch of dura. Do you happen to have a
> hires T2 or flair image? If so, you can use that in recon-all
&g
-boun...@nmr.mgh.harvard.edu] on behalf of Bruce Fischl
[fis...@nmr.mgh.harvard.edu]
Sent: Friday, October 10, 2014 1:58 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] Image normalization and pial/wm error
Hi Sneha
it looks like it is grabbing a bunch of dura. Do you happen to have a
hires T2 or flair imag
Hi Sneha
it looks like it is grabbing a bunch of dura. Do you happen to have a
hires T2 or flair image? If so, you can use that in recon-all
postprocessing to remove the dura. If not you can try using the graph
cuts skull stripping to get rid of some of it. I can't tell the accuracy
of the sur
