Re: [Freesurfer] How to extract the GM and WM

PM *To:* Freesurfer support list *Subject:* [Freesurfer] How to extract the GM and WM *External Email - Use Caution * *External Email - Use Caution * Hi Freesurfer experts: I want to extract the White Matter and the Gray Matter from a T1 image. I have extracted the brain by

Re: [Freesurfer] How to extract the GM and WM

behalf of Fischl, Bruce Sent: Monday, May 24, 2021 10:17 AM To: Freesurfer support list Subject: Re: [Freesurfer] How to extract the GM and WM Hi Aldo Usually we just run recon-all with -all instead of the individual -autorecon options. This will give you pretty much everything, including GM and

Re: [Freesurfer] How to extract the GM and WM

External Email - Use Caution Thanks a lot Bruce, Have a nice day, Aldo From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Fischl, Bruce Sent: Monday, May 24, 2021 10:17 AM To: Freesurfer support list Subject: Re: [Freesurfer] How to extract the GM and WM Hi Aldo

Re: [Freesurfer] How to extract the GM and WM

support list Subject: [Freesurfer] How to extract the GM and WM External Email - Use Caution External Email - Use Caution Hi Freesurfer experts: I want to extract the White Matter and the Gray Matter from a T1 image. I have extracted the brain by using the command: recon

[Freesurfer] How to extract the GM and WM

External Email - Use Caution Hi Freesurfer experts: I want to extract the White Matter and the Gray Matter from a T1 image. I have extracted the brain by using the command: recon-all with the option -autorecon1 Thanks a lot and have a nic day, Aldo