Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file

2024-10-09 Thread fsbuild
fer-boun...@nmr.mgh.harvard.edu> on behalf of Hoffmann, Malte,PhD <mhoffm...@mgh.harvard.edu> Sent: Wednesday, October 9, 2024 17:07 To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file [You don&#x

Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file

2024-10-09 Thread Hoffmann, Malte,PhD
noga.ker...@campus.technion.ac.il Sent: Wednesday, October 9, 2024 11:57 To: Freesurfer support list Subject: Re: [Freesurfer] FreeSurfer - extract rigid parameters from .ltafile External Email - Use Caution Sorry, I forgot to attached it. Target, moving, moving_mask and the .lt

Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file

2024-10-09 Thread Hoffmann, Malte,PhD
_ From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of noga.ker...@campus.technion.ac.il Sent: Wednesday, October 9, 2024 03:57 To: Freesurfer support list Subject: Re: [Freesurfer] FreeSurfer - extract rigidparameters from .ltafile External Email - Use Cauti

Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file

2024-10-09 Thread noga.ker...@campus.technion.ac.il
] FreeSurfer - extract rigid parameters from .lta file [You don't often get email from mhoffm...@mgh.harvard.edu. Learn why this is important at https://secure-web.cisco.com/19NIoews75g1MQJ7WWQgztI5gweAmpQkQi8uHDJfmZXHSP8HUGH7_bvQqUTEoz8xzbjxP56p3EiZLA6ji9SEemJ4O-GthL3LJMbFzgaz4xipjMcv

Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file

2024-10-08 Thread Hoffmann, Malte,PhD
06 To: Freesurfer support list Subject: Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file External Email - Use Caution Thanks You for the response! Another issue I encountered was with the .lta file that is being generated using mri_synthmorph. I want to use the .lta

Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file

2024-10-08 Thread noga.ker...@campus.technion.ac.il
From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve Sent: Tuesday, October 1, 2024 17:12 To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file You don't often get email fro

Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file

2024-10-01 Thread noga.ker...@campus.technion.ac.il
? Thanks again, Noga From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve Sent: Monday, September 30, 2024 17:02 To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file You don't

Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file

2024-10-01 Thread Douglas N. Greve
*From:* freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve *Sent:* Monday, September 30, 2024 17:02 *To:* freesurfer@nmr.mgh.harvard.edu *Subject:* Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta

Re: [Freesurfer] FreeSurfer - extract rigid parameters from .lta file

2024-09-30 Thread Douglas N. Greve
Use mri_coreg --mat2par file.lta On 9/29/2024 5:48 AM, noga.ker...@campus.technion.ac.il wrote: External Email - Use Caution Hello FreeSurfer Developers, I am using |mri_robust_register| to register a moving volume to a fixed one. The algorithm outputs the rigid transformation in a

[Freesurfer] FreeSurfer - extract rigid parameters from .lta file

2024-09-29 Thread noga.ker...@campus.technion.ac.il
External Email - Use Caution Hello FreeSurfer Developers, I am using mri_robust_register to register a moving volume to a fixed one. The algorithm outputs the rigid transformation in a .lta file. I need to extract the rigid parameters (3 rotation angles in degrees and 3 translati