Re: [Freesurfer] Fractional Anisotropy Command Question

2010-05-25 Thread Douglas N Greve
It is the input data (ie, the diffusion weighted 4D "time" series) you collect from each subject, so it will be different for each subject. doug Weisinger, Brian (NIH/OD) [E] wrote: > > > Hello, > > I am trying to run the dt_recon with the fractional anisotropy to do a > project with white mat

[Freesurfer] Fractional Anisotropy Command Question

2010-05-25 Thread Weisinger, Brian (NIH/OD) [E]
Hello, I am trying to run the dt_recon with the fractional anisotropy to do a project with white matter. I am running into a problem actually getting the command to work. I am trying to follow the example online dt_recon --i 6-1025.dcm --s M87102113 --o dti dt_recon --i f.nii --b f.bvals f