Re: [Freesurfer] FA to MNI

2017-12-01 Thread Douglas Greve
you can use mri_vol2vol with the --mni152reg flag. Run it with --help to get more info On 11/30/17 3:54 PM, Bruce Fischl wrote: > Hi John > > if your FA map is registered to the structurals (e.g. using bbregister) > then you would just compose that transform with the talairach.xfm in the > subje

Re: [Freesurfer] FA to MNI

2017-11-30 Thread John Anderson
Dear Dr Bruce, Thank you so much for the quick response. Yes I used bbregister, but I don't know how to transform correctly. I appreciate your guidance! peace J > Original Message > Subject: Re: [Freesurfer] FA to MNI > Local Time: November 30, 2017 3:54

Re: [Freesurfer] FA to MNI

2017-11-30 Thread Bruce Fischl
Hi John if your FA map is registered to the structurals (e.g. using bbregister) then you would just compose that transform with the talairach.xfm in the subject's mri/transforms dir. cheers Bruce On Thu, 30 Nov 2017, John Anderson wrote: > Dear Freesurfer experts, > I want to register FA map i

[Freesurfer] FA to MNI

2017-11-30 Thread John Anderson
Dear Freesurfer experts, I want to register FA map in subject space to MNI. How can I do it using freesurfer tools? Any advice is highly appreciated! J___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/li